RESEARCH: Β-LACTMASES
FOLDING PROJECT #16456 PROFILE

PROJECT TEAM

Manager(s): Sukrit Singh
Institution: Washington University in St. Louis

WORK UNIT INFO

Atoms: 33,222
Core: GRO_A7
Status: Public

Related Projects

TLDR; PROJECT SUMMARY AI BETA

This project looks at a super old version of the Tem-1 enzyme, which helps bacteria break down penicillin. By comparing it to modern versions, scientists hope to find hidden parts that could be targeted by new drugs to fight antibiotic resistance.

Note: This TLDR is a simplication and may not be 100% accurate.

OFFICAL PROJECT DESCRIPTION

This project studies the E240D mutant of Tem-1 β-Lactmase β-Lactmases are enzymes which break down penicillin-like antibiotics.

This is the most common method by which bacteria become resistant to such antibiotics.

This project is simulating the most probable common ancestor (dating back to around 2 billion years ago) of modern day Gram Negative beta-lactamases.

We hope to understand the funtional significance of various cryptic pockets found in these enzymes by comparing these results to simulations of modern beta-lactamases.

Finding such functional pockets could enable us to target these enzymes with drugs that might combat this form of antibiotic resistance.

RELATED TERMS GLOSSARY AI BETA

Note: Glossary items are a high level summary and may not be 100% accurate.

E240D

A mutant variant of Tem-1 beta-lactamase.

Technical: Biotechnology
Medicine / Pharmacology

E240D is a specific mutation within the Tem-1 beta-lactamase enzyme. This mutation alters the structure and function of the enzyme, potentially impacting its ability to break down penicillin-like antibiotics.


Tem-1

A type of beta-lactamase enzyme often found in bacteria.

Technical: Biotechnology
Medicine / Pharmacology

Tem-1 is a common type of beta-lactamase enzyme produced by certain bacteria. These enzymes break down penicillin and other antibiotic drugs, contributing to bacterial resistance.


Beta-Lactamase

An enzyme that breaks down beta-lactam antibiotics.

Technical: Biotechnology
Medicine / Pharmacology

Beta-lactamases are enzymes produced by bacteria. They have the ability to break down beta-lactam antibiotics, rendering these drugs ineffective in treating bacterial infections.


Antibiotics

Medicinal drugs used to kill or inhibit bacterial growth.

Technical: Biotechnology
Medicine / Pharmacology

Antibiotics are medications designed to combat bacterial infections. They work by either killing bacteria directly or preventing their growth and reproduction.


Gram Negative

A classification of bacteria based on their cell wall structure.

Technical: Biotechnology
Medicine / Pathology

Gram-negative bacteria are a category of microorganisms classified by their unique cell wall composition. This structural difference makes them more resistant to certain antibiotics.


Enzymes

Proteins that catalyze (speed up) biochemical reactions.

Technical: Biotechnology
Medicine / Biochemistry

Enzymes are specialized proteins essential for countless biological processes. They act as catalysts, accelerating chemical reactions within cells and organisms.

PROJECT FOLDING PPD AVERAGES BY GPU

Data as of Tuesday, 14 April 2026 06:31:28
Rank
Project
Model Name
Folding@Home Identifier
Make
Brand
GPU
Model
PPD
Average
Points WU
Average
WUs Day
Average
WU Time
Average

PROJECT FOLDING PPD AVERAGES BY CPU BETA

Data as of Tuesday, 14 April 2026 06:31:28
Rank
Project
CPU Model Logical
Processors (LP)
PPD-PLP
AVG PPD per 1 LP
ALL LP-PPD
(Estimated)
Make
1 RYZEN 9 3950X 16-CORE 32 11,700 374,400 AMD
2 RYZEN 9 3900X 12-CORE 24 14,068 337,632 AMD
3 RYZEN THREADRIPPER 2950X 16-CORE 32 6,692 214,144 AMD
4 RYZEN THREADRIPPER 1920X 12-CORE 24 7,123 170,952 AMD
5 RYZEN 7 2700X EIGHT-CORE 16 9,740 155,840 AMD
6 RYZEN 7 5800X 8-CORE 16 8,265 132,240 AMD
7 RYZEN 7 3700X 8-CORE 16 7,935 126,960 AMD
8 RYZEN 5 3600 6-CORE 12 8,539 102,468 AMD
9 RYZEN 3 3100 4-CORE 8 10,398 83,184 AMD
10 RYZEN 5 3500 6-CORE 6 13,329 79,974 AMD
11 XEON CPU E5-2690 V2 @ 3.00GHZ 20 3,475 69,500 Intel
12 XEON CPU E5-2630 0 @ 2.30GHZ 24 2,727 65,448 Intel
13 RYZEN 5 4600HS 12 5,053 60,636 AMD
14 CORE2 DUO CPU T7700 @ 2.40GHZ 12 4,704 56,448 Intel
15 RYZEN 5 2600 SIX-CORE 12 3,559 42,708 AMD
16 CORE I7-4790 CPU @ 3.60GHZ 8 4,508 36,064 Intel
17 CORE I5-7300HQ CPU @ 2.50GHZ 4 2,856 11,424 Intel
18 A8-6410 APU 4 85 340 AMD